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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015840699.1_cds_XP_016507710.1_20807
CDS Infomation

[gene=LOC107825374] [db_xref=GeneID:107825374] [protein=chaperonin CPN60-2, mitochondrial-like] [protein_id=XP_016507710.1] [location=join(124914..124951,125057..125081,125181..125312,126687..126846,126959..127134,127384..127479,127860..127964,128092..128178,128262..128351,128439..128519,128610..128678,128797..128874,128967..129062,129218..129317,129407..129510,129647..129752,129836..129914,130006..130111)] [gbkey=CDS]
Sequence

ATGTATCGTTTTGCAGCAAATCTTGCTTCCAAAGCCAGAGTTGCAAGAACCAGCACCCAA
CAAATTGGTGGAAGGTTAAATTGGAGTAGAAATTATGCTGCAAAGGATATTAGATTTGGA
GTTGAAGCTCGGGCTATGATGCTTCAAGGTGTTGAGGAACTTGCTGATGCTGTTAAAGTT
ACTATGGGTCCAAAGGGACGTAATGTGGTGATTGAACAAAGTTGGGGTGCACCCAAAGTA
ACAAAAGATGGCGTCACTGTCGCAAAAAGTGTTGAATTCAAGGACAAGATAAAAAATGTT
GGTGCAAGCCTTGTAAAACAAGTTGCCAATGCCACAAATGATGTTGCTGGTGATGGTACC
ACGTGTGCTACAGTCCTCACCCGAGCAATATTTGCTGAAGGATGCAAGTCAGTGGCAGCT
GGTATGAATGCAATGGACCTTAGACGGGGTATTACCATGGCTGTAGATTCTGTTGTAACA
AACCTGAAAAGCAGAGCACGGATGATCAGCACATCAGAGGAAATTGCACAGGTTGGGACT
ATCTCTGCAAATGGAGAAAGAGAAATTGGTGAGCTAATTGCAAAGGCTATGGAGAGAGTA
GGCAAGGAGGGAGTCATCACTATCCAAGACGGAAAGACACTATTCAATGAGTTGGAAGTT
GTTGAAGGGATGAAGCTGGACAGAGGTTACATTTCACCATACTTTATCACAAATCAGAAG
AACCAGAAATGTGAACTCGATGACCCACTAATTCTTATTCATGAGAAAAAGATCTCAAGT
GTTAATGCTGTTGTGAAAGCATTAGAGTTGGCTCTTAAGAGACAAAGACCCCTCTTAATT
GTGGCTGAAGATGTGGACAGTGAAGCACTTGCCACTCTTATTTTGAACAAGCTTCGTGCT
GGAATCAAAGTTTGTGCCATCAAAGCACCAGGCTTTGGTGAAAACAGGAAAGCTAATTTG
CAAGATCTTGCTATTTTAACTGGAGGCCAAGTCGTAACAGAAGAGCTTGGATTGAACATT
GAAAATGTGGAATTGGAGATGTTGGGATCATGTAAAAAGGTGGCTATTTCCAAGGATGAT
ACTGTCATTCTTGATGGCGCCGGTGAGAAGAAGTCCATAGAGGAACGATGTGAGCAGATT
AGATCAACCATTGAACTGAGCACATCTGATTATGACAAGGAGAAGTTGCAGGAAAGGCTA
GCTAAGATTTCAGGAGGTGTGGCTGTGTTAAAGATTGGAGGAGCTAGTGAAGCTGAGGTT
GGCGAAAAGAAAGATAGAGTCACTGATGCTTTGAATGCCACAAAGGCTGCCGTGGAGGAA
GGAATTGTTCCAGGTGGTGGTGTTGCTCTTCTTTATGCAGCAAAGGAATTGGATAAATTA
GAAACTGCCAACTTTGACCAGAAAATTGGTGTACAGATTATTCAGAATGCTCTAAAGACA
CCTGTACATACAATAGCTTCAAATGCAGGAGTAGAGGGTGCAGTCGTGGTTGGTAAACTG
TTGGAGCAGGACGACGCTGATCTTGGATATGATGCTGCCAAAGGTGAATATGTGGATATG
GTCAGGGCAGGAATCATTGACCCGTTGAAAGTGATCAGGACAGCCTTGGTCGATGCTGCT
AGCGTGTCGTCTCTTTTGACCACAACCGAAGCTGTTGTTGTCGAGCTTCCCAAGGATGAG
AAGGAAACTCCACCAATGGGTGGTGGCATGGGTGGCATGGACTACTAA

Peptide Sequence

PEP ID

XP_016507710.1
PEP Infomation

PREDICTED: chaperonin CPN60-2, mitochondrial-like [Nicotiana tabacum]
Sequence

MYRFAANLASKARVARTSTQQIGGRLNWSRNYAAKDIRFGVEARAMMLQGVEELADAVKV
TMGPKGRNVVIEQSWGAPKVTKDGVTVAKSVEFKDKIKNVGASLVKQVANATNDVAGDGT
TCATVLTRAIFAEGCKSVAAGMNAMDLRRGITMAVDSVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMERVGKEGVITIQDGKTLFNELEVVEGMKLDRGYISPYFITNQK
NQKCELDDPLILIHEKKISSVNAVVKALELALKRQRPLLIVAEDVDSEALATLILNKLRA
GIKVCAIKAPGFGENRKANLQDLAILTGGQVVTEELGLNIENVELEMLGSCKKVAISKDD
TVILDGAGEKKSIEERCEQIRSTIELSTSDYDKEKLQERLAKISGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYAAKELDKLETANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVVVGKLLEQDDADLGYDAAKGEYVDMVRAGIIDPLKVIRTALVDAA
SVSSLLTTTEAVVVELPKDEKETPPMGGGMGGMDY

Transcript Sequence

Gene sequence data has not been registered.